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    APPB1 Plant invertase/pectin methylesterase inhibitor superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828566, updated on 18-Sep-2024

    Summary

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    Official Symbol
    APPB1
    Official Full Name
    Plant invertase/pectin methylesterase inhibitor superfamily protein
    Primary source
    TAIR:AT4G24640
    Locus tag
    AT4G24640
    See related
    Araport:AT4G24640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22K18.160; F22K18_160
    Summary
    Encodes AppB protein (AppB1).
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    Genomic context

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    See APPB1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (12717788..12719287)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene phosphoglucose isomerase 1 Neighboring gene DHHC-type zinc finger family protein Neighboring gene Putative membrane lipoprotein Neighboring gene isopentenyltransferase 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_118597.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Plant invertase/pectin methylesterase inhibitor superfamily protein
    NP_194195.1
    • APPB1; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G50030.1); Has 48 Blast hits to 48 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12717788..12719287
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118597.4 → NP_194195.1  Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194195.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UW50, A0A5S9XXP3, Q9SB59
      Conserved Domains (1) summary
      smart00856
      Location:27 → 164
      PMEI; Plant invertase/pectin methylesterase inhibitor
    Nucleotide Protein
    Heading Accession and Version

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