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    Urb2/Npa2 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829138, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Urb2/Npa2 family protein
    Primary source
    TAIR:AT4G30150
    Locus tag
    AT4G30150
    See related
    Araport:AT4G30150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6G3.180; F6G3_180
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (14742292..14750042)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene heavy metal atpase 3 Neighboring gene DUF630 family protein (DUF630 and DUF632) Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene villin 4 Neighboring gene Peroxidase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001341998.1
    NM_119161.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Urb2/Npa2 family protein
    NP_194744.2
    • CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14742292..14750042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119161.3 → NP_194744.2  Urb2/Npa2 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194744.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XX84, A0A654FU62, F4JPJ1
      Conserved Domains (1) summary
      pfam10441
      Location:1770 → 2005
      Urb2; Urb2/Npa2 family

    2. NM_001341998.1 → NP_001329710.1  Urb2/Npa2 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8K0, A0A5S9XX84, A0A654FU62
    Nucleotide Protein
    Heading Accession and Version

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