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    ADF9 actin depolymerizing factor 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829649, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ADF9
    Official Full Name
    actin depolymerizing factor 9
    Primary source
    TAIR:AT4G34970
    Locus tag
    AT4G34970
    See related
    Araport:AT4G34970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    actin depolymerizing factor 9; M4E13.30; M4E13_30
    Summary
    A member of actin polymerizing factors (ADFs)family, ADF9 primarily functions as an actin bundling protein.
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    Genomic context

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    See ADF9 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (16653704..16654955)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Neighboring gene tRNA-Thr Neighboring gene subtilisin-like serine protease 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ACTIN DEPOLYMERIZING FACTOR9 controls development and gene expression in Arabidopsis. Burgos-Rivera B, et al. Plant Mol Biol, 2008 Dec. PMID 18830798, Free PMC Article
    2. Arabidopsis actin-depolymerizing factors (ADFs) 1 and 9 display antagonist activities. Tholl S, et al. FEBS Lett, 2011 Jun 23. PMID 21570971
    3. Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution. Nan Q, et al. Plant Cell, 2017 Feb. PMID 28123105, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_119663.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within actin filament bundle assembly IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in actin filament depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within actin filament polymerization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    actin depolymerizing factor 9
    NP_195223.2
    • actin depolymerizing factor 9 (ADF9); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 5 (TAIR:AT2G16700.1); Has 1376 Blast hits to 1375 proteins in 262 species: Archae - 0; Bacteria - 3; Metazoa - 546; Fungi - 141; Plants - 513; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16653704..16654955
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119663.4 → NP_195223.2  actin depolymerizing factor 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195223.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49606
      UniProtKB/TrEMBL
      A0A178V0D2, A0A5S9XZK2
      Conserved Domains (1) summary
      cl15697
      Location:1 → 141
      ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O49606.2

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