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    RHA3B RING-H2 finger A3B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829700, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RHA3B
    Official Full Name
    RING-H2 finger A3B
    Primary source
    TAIR:AT4G35480
    Locus tag
    AT4G35480
    See related
    Araport:AT4G35480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15J1.50; F15J1_50; RING-H2 finger A3B; RING-H2 FINGER PROTEIN RHA3B
    Summary
    Encodes a putative RING-H2 finger protein RHA3b.
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    Genomic context

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    See RHA3B in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (16851972..16853035, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NADPH-dependent thioredoxin reductase B Neighboring gene plant intracellular ras group-related LRR 4 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene mitochondrial ribosomal protein L11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ligand-induced monoubiquitination of BIK1 regulates plant immunity. Ma X, et al. Nature, 2020 May. PMID 32404997, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119713.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein ubiquitination IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RING-H2 finger A3B
    NP_195273.1
    • RING-H2 finger A3B (RHA3B); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A3A (TAIR:AT2G17450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16851972..16853035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119713.4 → NP_195273.1  RING-H2 finger A3B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195273.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4TU10, Q9ZT49
      UniProtKB/TrEMBL
      A0A178UXS9, A0A5S9XZA5
      Conserved Domains (1) summary
      cd16454
      Location:112 → 155
      RING-H2_PA-TM-RING; RING finger, H2 subclass, found in the PA-TM-RING ubiquitin ligase family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZT49.1

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