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    GH9B16 glycosyl hydrolase 9B16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830054, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GH9B16
    Official Full Name
    glycosyl hydrolase 9B16
    Primary source
    TAIR:AT4G38990
    Locus tag
    AT4G38990
    See related
    Araport:AT4G38990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtGH9B16; F19H22.90; F19H22_90; glycosyl hydrolase 9B16
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    Genomic context

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    See GH9B16 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (18168676..18170949, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene fructose-bisphosphate aldolase 2 Neighboring gene uncharacterized protein Neighboring gene glycosyl hydrolase 9B17 Neighboring gene glycosyl hydrolase 9B18

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycosyl hydrolase 9B16
    NP_195610.3
    • glycosyl hydrolase 9B16 (GH9B16); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B17 (TAIR:AT4G39000.1); Has 1522 Blast hits to 1511 proteins in 198 species: Archae - 2; Bacteria - 400; Metazoa - 176; Fungi - 17; Plants - 897; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18168676..18170949 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342521.1 → NP_001329141.1  glycosyl hydrolase 9B16 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JUJ7, Q9SVJ4
      UniProtKB/TrEMBL
      A0A5S9Y0A3

    2. NM_120059.3 → NP_195610.3  glycosyl hydrolase 9B16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195610.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SVJ4
      Conserved Domains (1) summary
      cl02959
      Location:1 → 335
      Glyco_hydro_9; Glycosyl hydrolase family 9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SVJ4.1

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