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    BG3 beta-1,3-glucanase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824891, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BG3
    Official Full Name
    beta-1,3-glucanase 3
    Primary source
    TAIR:AT3G57240
    Locus tag
    AT3G57240
    See related
    Araport:AT3G57240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    3-glucanase 3; AtBG3; beta-1
    Summary
    encodes a member of glycosyl hydrolase family 17
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    Genomic context

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    See BG3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (21181642..21183144, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Glycosyl transferase family 4 protein Neighboring gene AGAMOUS-like 16 Neighboring gene ncRNA Neighboring gene Emsy N Terminus (ENT) domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Induction of Arabidopsis defense genes by virulent and avirulent Pseudomonas syringae strains and by a cloned avirulence gene. Dong X, et al. Plant Cell, 1991 Jan. PMID 1824335, Free PMC Article
    2. Subcellular dynamics and role of Arabidopsis β-1,3-glucanases in cell-to-cell movement of tobamoviruses. Zavaliev R, et al. Mol Plant Microbe Interact, 2013 Sep. PMID 23656331
    3. Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. Boudart G, et al. Proteomics, 2005 Jan. PMID 15593128
    4. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Bindschedler LV, et al. Phytochemistry, 2008 Jul. PMID 18538804
    5. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115584.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables glucan endo-1,3-beta-D-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 
    located_in secretory vesicle HDA PubMed 

    General protein information

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    Preferred Names
    beta-1,3-glucanase 3
    NP_191283.2
    • ''beta-1,3-glucanase 3'' (BG3); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to bacterium; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 2 (TAIR:AT3G57260.1); Has 2135 Blast hits to 2122 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 16; Plants - 2105; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21181642..21183144 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115584.5 → NP_191283.2  beta-1,3-glucanase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191283.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4J270, Q9M2M3, Q9ZRI3
      UniProtKB/TrEMBL
      A0A178V678
      Conserved Domains (1) summary
      pfam00332
      Location:35 → 340
      Glyco_hydro_17; Glycosyl hydrolases family 17
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4J270.1

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