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    Integrin-linked protein kinase family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825045, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Integrin-linked protein kinase family
    Primary source
    TAIR:AT3G58760
    Locus tag
    AT3G58760
    See related
    Araport:AT3G58760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (21728144..21732086)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene citrate synthase 1 Neighboring gene citrate synthase 2 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene K-box region and MADS-box transcription factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis and experimentation of plant serine/ threonine/tyrosine-specific protein kinases. Rudrabhatla P, et al. Plant Mol Biol, 2006 Jan. PMID 16429265
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115738.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine/tyrosine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Integrin-linked protein kinase family
    NP_567074.2
    • Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT4G18950.1); Has 165609 Blast hits to 134537 proteins in 4793 species: Archae - 244; Bacteria - 16399; Metazoa - 69591; Fungi - 13531; Plants - 33415; Viruses - 845; Other Eukaryotes - 31584 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21728144..21732086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339932.1 → NP_001325818.1  Integrin-linked protein kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMD9

    2. NM_001339933.1 → NP_001325814.1  Integrin-linked protein kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMD5, A0A5S9XMR3, A0A654FJ17
      Conserved Domains (3) summary
      cd13999
      Location:235 → 487
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
      sd00045
      Location:116 → 142
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:116 → 206
      Ank_2; Ankyrin repeats (3 copies)

    3. NM_001339934.1 → NP_001325816.1  Integrin-linked protein kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMD9

    4. NM_001339935.1 → NP_001325817.1  Integrin-linked protein kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMD5, A0A5S9XMR3, A0A654FJ17
      Conserved Domains (3) summary
      cd13999
      Location:235 → 487
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
      sd00045
      Location:116 → 142
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:116 → 206
      Ank_2; Ankyrin repeats (3 copies)

    5. NM_001339936.1 → NP_001325815.1  Integrin-linked protein kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMD6

    6. NM_115738.4 → NP_567074.2  Integrin-linked protein kinase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567074.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EXU1, F4J703, Q9LXS5
      Conserved Domains (3) summary
      cd13999
      Location:172 → 424
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
      sd00045
      Location:53 → 79
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:53 → 143
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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