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    desiccation-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825448, updated on 18-Sep-2024

    Summary

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    Official Full Name
    desiccation-like protein
    Primary source
    TAIR:AT3G62730
    Locus tag
    AT3G62730
    See related
    Araport:AT3G62730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (23207854..23209533, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene xylosyltransferase 1 Neighboring gene pseudo Neighboring gene tRNA-Gly Neighboring gene beta glucosidase 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001340170.1
    NM_116138.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    desiccation-like protein
    NP_191832.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23207854..23209533 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116138.4 → NP_191832.1  desiccation-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191832.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XNW4, A0A654FK57, Q9LZJ2
      Conserved Domains (1) summary
      pfam13668
      Location:33 → 200
      Ferritin_2; Ferritin-like domain

    2. NM_001340170.1 → NP_001327071.1  desiccation-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR66
    Nucleotide Protein
    Heading Accession and Version

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