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    HSP17.6A heat shock protein 17.6A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831076, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HSP17.6A
    Official Full Name
    heat shock protein 17.6A
    Primary source
    TAIR:AT5G12030
    Locus tag
    AT5G12030
    See related
    Araport:AT5G12030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT-HSP17.6A; F14F18.200; F14F18_200; HEAT SHOCK PROTEIN 17.6; heat shock protein 17.6A; HSP17.6
    Summary
    Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.
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    Genomic context

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    See HSP17.6A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (3883957..3884838, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nuclease Neighboring gene 17.6 kDa class II heat shock protein Neighboring gene Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Activation of catalase activity by a peroxisome-localized small heat shock protein Hsp17.6CII. Li G, et al. J Genet Genomics, 2017 Aug 20. PMID 28869112
    2. At-HSP17.6A, encoding a small heat-shock protein in Arabidopsis, can enhance osmotolerance upon overexpression. Sun W, et al. Plant J, 2001 Sep. PMID 11576425
    3. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. a novel peroxisome-located catalase chaperone that is involved in plant abiotic stress resistance by activating catalase activity
      Title: Activation of catalase activity by a peroxisome-localized small heat shock protein Hsp17.6CII.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_121241.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables unfolded protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
    acts_upstream_of_or_within hyperosmotic response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein folding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heat shock protein 17.6A
    NP_196764.1
    • heat shock protein 17.6A (HSP17.6A); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: 17.6 kDa class II heat shock protein (TAIR:AT5G12020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3883957..3884838 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121241.3 → NP_196764.1  heat shock protein 17.6A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196764.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81822, Q38815, Q7DLL5
      UniProtKB/TrEMBL
      A0A178UFY9, A0A5S9Y3G3
      Conserved Domains (1) summary
      pfam00011
      Location:49 → 137
      HSP20; Hsp20/alpha crystallin family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81822.1

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