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    CML43 calmodulin like 43 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834473, updated on 18-Sep-2024

    Summary

    Official Symbol
    CML43
    Official Full Name
    calmodulin like 43
    Primary source
    TAIR:AT5G44460
    Locus tag
    AT5G44460
    See related
    Araport:AT5G44460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    calmodulin like 43; MFC16.12; MFC16_12
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    Genomic context

    See CML43 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (17916993..17918001)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FAD-binding Berberine family protein Neighboring gene alpha amino-terminal protein methyltransferase Neighboring gene ribonuclease H superfamily polynucleotidyl transferase Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    NM_123813.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    is_active_in cytosol PubMed 
    is_active_in nucleus PubMed 
    located_in plasma membrane  

    General protein information

    Preferred Names
    calmodulin like 43
    NP_199259.1
    • calmodulin like 43 (CML43); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 15485 Blast hits to 11560 proteins in 1261 species: Archae - 1; Bacteria - 65; Metazoa - 6030; Fungi - 3167; Plants - 4134; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17916993..17918001
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123813.4 → NP_199259.1  calmodulin like 43 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199259.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q42141, Q9FI19
      UniProtKB/TrEMBL
      A0A178UMU5, A0A5S9YD92, A0A654G7V2
      Conserved Domains (1) summary
      PTZ00184
      Location:33 → 174
      PTZ00184; calmodulin; Provisional
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