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    glyoxal oxidase-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832078, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glyoxal oxidase-related protein
    Primary source
    TAIR:AT5G19580
    Locus tag
    AT5G19580
    See related
    Araport:AT5G19580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20D1.100; T20D1_100
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (6607371..6609799, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ROP uanine nucleotide exchange factor 10 Neighboring gene uncharacterized protein Neighboring gene DUF538 family protein (Protein of unknown function, DUF538) Neighboring gene uncharacterized protein Neighboring gene sulfate transporter 3;5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_121963.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glyoxal oxidase-related protein
    NP_197459.1
    • glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G67290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6607371..6609799 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121963.4 → NP_197459.1  glyoxal oxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197459.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UMI2, F4K172, Q8RY19
      Conserved Domains (2) summary
      cd02851
      Location:485 → 593
      E_set_GO_C; C-terminal Early set domain associated with the catalytic domain of galactose oxidase
      pfam07250
      Location:91 → 334
      Glyoxal_oxid_N; Glyoxal oxidase N-terminus
    Nucleotide Protein
    Heading Accession and Version

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