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    ATP-PRT1 ATP phosphoribosyl transferase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842175, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATP-PRT1
    Official Full Name
    ATP phosphoribosyl transferase 1
    Primary source
    TAIR:AT1G58080
    Locus tag
    AT1G58080
    See related
    Araport:AT1G58080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATATP-PRT1; ATP PHOSPHORIBOSYL TRANSFERASE; ATP phosphoribosyl transferase 1; HISN1A; T15M6.9; T15M6_9
    Summary
    ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis
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    Genomic context

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    See ATP-PRT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (21504314..21507679, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RNA helicase family protein Neighboring gene WEB family protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene TCP family transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning and characterization of ATP-phosphoribosyl transferase from Arabidopsis, a key enzyme in the histidine biosynthetic pathway. Ohta D, et al. Plant Physiol, 2000 Mar. PMID 10712555, Free PMC Article
    2. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_104590.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP phosphoribosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within L-histidine biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in L-histidine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 

    General protein information

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    Preferred Names
    ATP phosphoribosyl transferase 1
    NP_176105.1
    • ATP phosphoribosyl transferase 1 (ATP-PRT1); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 2 (TAIR:AT1G09795.1); Has 6414 Blast hits to 6414 proteins in 2199 species: Archae - 208; Bacteria - 4137; Metazoa - 2; Fungi - 141; Plants - 73; Viruses - 0; Other Eukaryotes - 1853 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21504314..21507679 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104590.4 → NP_176105.1  ATP phosphoribosyl transferase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176105.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S762
      UniProtKB/TrEMBL
      A0A178WM39, A0A654EKY6
      Conserved Domains (1) summary
      PLN02245
      Location:6 → 411
      PLN02245; ATP phosphoribosyl transferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S762.1

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