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    ATCSLB05 Cellulose synthase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827195, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATCSLB05
    Official Full Name
    Cellulose synthase family protein
    Primary source
    TAIR:AT4G15290
    Locus tag
    AT4G15290
    See related
    Araport:AT4G15290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLB5; CELLULOSE SYNTHASE LIKE 5; CSLB05; DL3690C; FCAALL.256
    Summary
    Encodes a gene similar to cellulose synthase. Mutants exhibit shorter root hairs under phosphate-deficient conditions.
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    Genomic context

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    See ATCSLB05 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (8721482..8726733, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glucosyltransferase-like protein Neighboring gene UDP-glucosyl transferase 71B5 Neighboring gene cytochrome P450, family 702, subfamily A, polypeptide 2 Neighboring gene cytochrome P450, family 702, subfamily A, polypeptide 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coexpression-based clustering of Arabidopsis root genes predicts functional modules in early phosphate deficiency signaling. Lin WD, et al. Plant Physiol, 2011 Mar. PMID 21248074, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_117617.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase (UDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellulose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within root hair elongation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cellulose synthase family protein
    NP_193264.3
    • ATCSLB05; FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2274 Blast hits to 2142 proteins in 418 species: Archae - 1; Bacteria - 625; Metazoa - 0; Fungi - 5; Plants - 1626; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8721482..8726733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117617.6 → NP_193264.3  Cellulose synthase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193264.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23383, Q0WT40, Q7XA79
      UniProtKB/TrEMBL
      A0A654FPK8, W8Q2Z8
      Conserved Domains (2) summary
      PLN02190
      Location:1 → 755
      PLN02190; cellulose synthase-like protein
      cl11394
      Location:253 → 510
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WT40.2

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