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    Polyketide cyclase / dehydrase and lipid transport protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827485, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Polyketide cyclase / dehydrase and lipid transport protein
    Primary source
    TAIR:AT4G17650
    Locus tag
    AT4G17650
    See related
    Araport:AT4G17650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL4860W; FCAALL.381
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (9827467..9829768)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glycine-rich protein Neighboring gene casein kinase II beta chain 2 Neighboring gene Protein kinase superfamily protein Neighboring gene senescence-associated family protein (DUF581)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_117873.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ubiquinone binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular respiration IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Polyketide cyclase / dehydrase and lipid transport protein
    NP_193500.1
    • Polyketide cyclase / dehydrase and lipid transport protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); Has 2562 Blast hits to 2558 proteins in 1000 species: Archae - 0; Bacteria - 1601; Metazoa - 177; Fungi - 106; Plants - 52; Viruses - 1; Other Eukaryotes - 625 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9827467..9829768
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117873.4 → NP_193500.1  Polyketide cyclase / dehydrase and lipid transport protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193500.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V105, F4JP95, Q8LAA4
      Conserved Domains (1) summary
      cd07813
      Location:100 → 238
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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