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    Gm20868 predicted gene, 20868 [ Mus musculus (house mouse) ]

    Gene ID: 100041284, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Gm20868provided by MGI
    Official Full Name
    predicted gene, 20868provided by MGI
    Primary source
    MGI:MGI:5434224
    See related
    Ensembl:ENSMUSG00000136896 AllianceGenome:MGI:5434224
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See Gm20868 in Genome Data Viewer
    Location:
    Y; Y C3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) Y NC_000087.8 (71309105..71311417, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) Y NC_000087.7 (71297836..71300148, complement)

    Chromosome Y - NC_000087.8Genomic Context describing neighboring genes Neighboring gene predicted gene 28840 Neighboring gene predicted gene, 20866 Neighboring gene RIKEN cDNA 1700040F15 gene Neighboring gene multifunctional methyltransferase subunit TRM112-like protein pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100041284
    Names
    spermiogenesis specific transcript on the Y 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001160128.2 → NP_001153600.1  uncharacterized protein LOC100041284

      Status: VALIDATED

      Source sequence(s)
      AC235091
      UniProtKB/TrEMBL
      Q62456, Q9D9T3
      Related
      ENSMUST00000338075.1
      Conserved Domains (1) summary
      pfam02513
      Location:21 → 69
      Spin-Ssty; Spin/Ssty Family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000087.8 Reference GRCm39 C57BL/6J

      Range
      71309105..71311417 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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