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    Pentatricopeptide repeat (PPR-like) superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817823, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pentatricopeptide repeat (PPR-like) superfamily protein
    Primary source
    TAIR:AT2G32630
    Locus tag
    AT2G32630
    See related
    Araport:AT2G32630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T26B15.19; T26B15_19
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (13844780..13846708)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cellulose synthase-like B1 Neighboring gene cellulose synthase-like B Neighboring gene Lycopene beta/epsilon cyclase protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128822.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pentatricopeptide repeat (PPR-like) superfamily protein
    NP_180822.1
    • Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 59391 Blast hits to 14965 proteins in 315 species: Archae - 4; Bacteria - 81; Metazoa - 864; Fungi - 1178; Plants - 55320; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13844780..13846708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128822.2 → NP_180822.1  Pentatricopeptide repeat (PPR-like) superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180822.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8S8P6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S8P6.1

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