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    hypothetical protein (DUF863) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842550, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF863)
    Primary source
    TAIR:AT1G62530
    Locus tag
    AT1G62530
    See related
    Araport:AT1G62530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T3P18.9; T3P18_9
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (23146200..23148367, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene uncharacterized protein Neighboring gene sulfated surface-like glycoprotein Neighboring gene flavin-monooxygenase glucosinolate S-oxygenase 2 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001124062.2
    NM_104932.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF863)
    NP_001117534.1
    • Plant protein of unknown function (DUF863); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G12120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_176442.2
    • Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G12120.1); Has 96 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23146200..23148367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001124062.2 → NP_001117534.1  hypothetical protein (DUF863) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117534.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0MED9, Q1PFH6
      Conserved Domains (1) summary
      pfam05904
      Location:201 → 272
      DUF863; Plant protein of unknown function (DUF863)

    2. NM_104932.3 → NP_176442.2  hypothetical protein (DUF863) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176442.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0MED9, Q1PFH6
      Conserved Domains (1) summary
      pfam05904
      Location:201 → 272
      DUF863; Plant protein of unknown function (DUF863)
    Nucleotide Protein
    Heading Accession and Version

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