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    IAA10 indoleacetic acid-induced protein 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839290, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IAA10
    Official Full Name
    indoleacetic acid-induced protein 10
    Primary source
    TAIR:AT1G04100
    Locus tag
    AT1G04100
    See related
    Araport:AT1G04100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AUXIN-INDUCED PROTEIN 10; F20D22.13; F20D22_13; indoleacetic acid-induced protein 10
    Summary
    Auxin induced gene, IAA10 (IAA10).
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    Genomic context

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    See IAA10 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (1059470..1061209)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene vacuolar sorting-associated protein (DUF946) Neighboring gene uncharacterized protein Neighboring gene Subtilase family protein Neighboring gene multidrug resistance-associated protein 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetics of Aux/IAA and ARF action in plant growth and development. Liscum E, et al. Plant Mol Biol, 2002 Jun-Jul. PMID 12036262
    2. Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis. Piya S, et al. Front Plant Sci, 2014. PMID 25566309, Free PMC Article
    3. The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Vernoux T, et al. Mol Syst Biol, 2011 Jul 5. PMID 21734647, Free PMC Article
    4. Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. de Lucas M, et al. Plant Cell, 2016 Oct. PMID 27650334, Free PMC Article
    5. A user-friendly platform for yeast two-hybrid library screening using next generation sequencing. Erffelinck ML, et al. PLoS One, 2018. PMID 30576311, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_100291.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to auxin TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    indoleacetic acid-induced protein 10
    NP_171906.1
    • indoleacetic acid-induced protein 10 (IAA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 11 (TAIR:AT4G28640.3); Has 1513 Blast hits to 1512 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1512; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1059470..1061209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100291.3 → NP_171906.1  indoleacetic acid-induced protein 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171906.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q38828
      UniProtKB/TrEMBL
      A0A178W8Y8, A0A5S9SIC3, A0A654E7N6
      Conserved Domains (1) summary
      pfam02309
      Location:42 → 256
      AUX_IAA; AUX/IAA family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q38828.1

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