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    Wall-associated kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838195, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Wall-associated kinase family protein
    Primary source
    TAIR:AT1G16260
    Locus tag
    AT1G16260
    See related
    Araport:AT1G16260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3O9.6; F3O9_6
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (5559498..5562192, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Target SNARE coiled-coil domain protein Neighboring gene syntaxin of plants 51 Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein Neighboring gene RNA helicase 36 Neighboring gene transglycosylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UV-B signaling pathways with different fluence-rate response profiles are distinguished in mature Arabidopsis leaf tissue by requirement for UVR8, HY5, and HYH. Brown BA, et al. Plant Physiol, 2008 Feb. PMID 18055587, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001198080.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables polysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Wall-associated kinase family protein
    NP_001185009.1
    • Wall-associated kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF calcium-binding (InterPro:IPR013091), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Wall-associated kinase family protein (TAIR:AT1G79670.1).
    NP_173076.1
    • Wall-associated kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF calcium-binding (InterPro:IPR013091), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Wall-associated kinase family protein (TAIR:AT1G79670.1); Has 123075 Blast hits to 119967 proteins in 4481 species: Archae - 119; Bacteria - 13868; Metazoa - 46954; Fungi - 10147; Plants - 33759; Viruses - 489; Other Eukaryotes - 17739 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5559498..5562192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332218.1 → NP_001323321.1  Wall-associated kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWN7, A0A654EAF6

    2. NM_101492.3 → NP_173076.1  Wall-associated kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173076.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SA25
      UniProtKB/TrEMBL
      A0A178WDV6, A0A654EAF6
      Conserved Domains (3) summary
      pfam08488
      Location:171 → 270
      WAK; Wall-associated kinase
      cd14066
      Location:396 → 663
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam13947
      Location:33 → 96
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding

    3. NM_001198080.1 → NP_001185009.1  Wall-associated kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185009.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SA25
      UniProtKB/TrEMBL
      A0A178WDV6, A0A654EAF6
      Conserved Domains (3) summary
      pfam08488
      Location:171 → 270
      WAK; Wall-associated kinase
      cd14066
      Location:396 → 663
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam13947
      Location:33 → 96
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SA25.1

    Gene LinkOut

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