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    outer envelope pore 24B-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841085, updated on 18-Sep-2024

    Summary

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    Official Full Name
    outer envelope pore 24B-like protein
    Primary source
    TAIR:AT1G45170
    Locus tag
    AT1G45170
    See related
    Araport:AT1G45170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27F5.25; F27F5_25
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (17095980..17098041, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene downregulated in DIF1 18

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Preprotein recognition by the Toc complex. Becker T, et al. EMBO J, 2004 Feb 11. PMID 14765117, Free PMC Article
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001084211.1
    NM_103591.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables porin activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables voltage-gated monoatomic cation channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of monoatomic ion transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in etioplast membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in plastid HDA PubMed 
    part_of pore complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    outer envelope pore 24B-like protein
    NP_001077680.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_175131.3
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17095980..17098041 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103591.4 → NP_175131.3  outer envelope pore 24B-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175131.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MR28, Q1H5C9, Q8GX28, Q9MAJ2
      UniProtKB/TrEMBL
      A0A178W6X4, A0A5S9WMB5

    2. NM_001084211.1 → NP_001077680.1  outer envelope pore 24B-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077680.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DYM8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1H5C9.1

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