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    RIP4 ROP interactive partner 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844179, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RIP4
    Official Full Name
    ROP interactive partner 2
    Primary source
    TAIR:AT1G78430
    Locus tag
    AT1G78430
    See related
    Araport:AT1G78430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3F9.6; F3F9_6; ROP interactive partner 2; ROP interactive partner 4
    Summary
    Encodes RIP4 (ROP interactive partner 4), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants).
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    Genomic context

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    See RIP4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (29508951..29511021)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene VQ motif-containing protein Neighboring gene RING/U-box superfamily protein Neighboring gene gibberellin 2-beta-dioxygenase Neighboring gene SOUL heme-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RIP3 and AtKinesin-13A - a novel interaction linking Rho proteins of plants to microtubules. Mucha E, et al. Eur J Cell Biol, 2010 Dec. PMID 20832900
    2. RIP1 (ROP Interactive Partner 1)/ICR1 marks pollen germination sites and may act in the ROP1 pathway in the control of polarized pollen growth. Li S, et al. Mol Plant, 2008 Nov. PMID 19825600, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_106490.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ROP interactive partner 2
    NP_177964.2
    • ROP interactive partner 2 (RIP2); BEST Arabidopsis thaliana protein match is: interactor of constitutive active rops 1 (TAIR:AT1G17140.2); Has 44057 Blast hits to 24944 proteins in 2009 species: Archae - 603; Bacteria - 6095; Metazoa - 22225; Fungi - 3626; Plants - 1909; Viruses - 198; Other Eukaryotes - 9401 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29508951..29511021
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106490.4 → NP_177964.2  ROP interactive partner 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177964.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IA81, Q9M9F9
      UniProtKB/TrEMBL
      A0A178W8E0, A0A5S9WVF9
      Conserved Domains (1) summary
      COG1196
      Location:61 → 247
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M9F9.2

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