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    GTE4 global transcription factor group E4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837133, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GTE4
    Official Full Name
    global transcription factor group E4
    Primary source
    TAIR:AT1G06230
    Locus tag
    AT1G06230
    See related
    Araport:AT1G06230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9P14.9; F9P14_9; global transcription factor group E4
    Summary
    This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.
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    Genomic context

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    See GTE4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (1906963..1911056)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S5/Elongation factor G/III/V family protein Neighboring gene CLAVATA3/ESR-RELATED 3 Neighboring gene diiron containing four-helix bundle family ferritin protein, putative (Protein of unknown function DUF455) Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene Cysteine proteinases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bromodomain-containing factor GTE4 regulates Arabidopsis immune response. Zhou Q, et al. BMC Biol, 2022 Nov 13. PMID 36372880, Free PMC Article
    2. The Arabidopsis BET bromodomain factor GTE4 is involved in maintenance of the mitotic cell cycle during plant development. Airoldi CA, et al. Plant Physiol, 2010 Mar. PMID 20032077, Free PMC Article
    3. RNAi-mediated gene silencing reveals involvement of Arabidopsis chromatin-related genes in Agrobacterium-mediated root transformation. Crane YM, et al. Proc Natl Acad Sci U S A, 2007 Sep 18. PMID 17827277, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. GTE4 is involved in the activation and maintenance of cell division in the meristems and by this controls cell numbers in most organs.
      Title: The Arabidopsis BET bromodomain factor GTE4 is involved in maintenance of the mitotic cell cycle during plant development.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001197993.2
    NM_001331622.1
    NM_100505.3
    NM_179270.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sequence-specific double-stranded DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA-mediated transformation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in negative regulation of gene expression IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of mitotic cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within root development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    global transcription factor group E4
    NP_001318932.1
    • global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1).
    NP_172113.1
    • global transcription factor group E4 (GTE4); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1); Has 9656 Blast hits to 6188 proteins in 362 species: Archae - 8; Bacteria - 274; Metazoa - 4793; Fungi - 1365; Plants - 669; Viruses - 49; Other Eukaryotes - 2498 (source: NCBI BLink).
    NP_849601.1
    • global transcription factor group E4 (GTE4); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1); Has 9656 Blast hits to 6188 proteins in 362 species: Archae - 8; Bacteria - 274; Metazoa - 4793; Fungi - 1365; Plants - 669; Viruses - 49; Other Eukaryotes - 2498 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1906963..1911056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331622.1 → NP_001318932.1  global transcription factor group E4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LNC4
      UniProtKB/TrEMBL
      A0A178WDM0, A0A5S9SXB6
      Conserved Domains (3) summary
      cd05506
      Location:421 → 519
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      PRK04335
      Location:46 → 179
      PRK04335; cell division protein ZipA; Provisional
      pfam17035
      Location:607 → 669
      BET; Bromodomain extra-terminal - transcription regulation

    2. NM_001197993.2 → NP_001184922.1  global transcription factor group E4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001184922.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LNC4
      UniProtKB/TrEMBL
      A0A178WDM0, A0A5S9SXB6
      Conserved Domains (3) summary
      cd05506
      Location:421 → 519
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      PRK04335
      Location:46 → 179
      PRK04335; cell division protein ZipA; Provisional
      pfam17035
      Location:607 → 669
      BET; Bromodomain extra-terminal - transcription regulation

    3. NM_179270.2 → NP_849601.1  global transcription factor group E4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849601.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LNC4
      UniProtKB/TrEMBL
      A0A178WDM0, A0A5S9SXB6
      Conserved Domains (3) summary
      cd05506
      Location:421 → 519
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      PRK04335
      Location:46 → 179
      PRK04335; cell division protein ZipA; Provisional
      pfam17035
      Location:607 → 669
      BET; Bromodomain extra-terminal - transcription regulation

    4. NM_100505.3 → NP_172113.1  global transcription factor group E4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172113.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LNC4
      UniProtKB/TrEMBL
      A0A178WDM0, A0A5S9SXB6
      Conserved Domains (3) summary
      cd05506
      Location:421 → 519
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      PRK04335
      Location:46 → 179
      PRK04335; cell division protein ZipA; Provisional
      pfam17035
      Location:607 → 669
      BET; Bromodomain extra-terminal - transcription regulation
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LNC4.1

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