U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    N-lysine methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844151, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    N-lysine methyltransferase
    Primary source
    TAIR:AT1G78150
    Locus tag
    AT1G78150
    See related
    Araport:AT1G78150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T11I11.9; T11I11_9
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (29404648..29406752)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Major facilitator superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene pumilio 7 Neighboring gene E3 ubiquitin-protein ligase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_001198495.1
    NM_106465.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    N-lysine methyltransferase
    NP_001031296.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001185424.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1).
    NP_177939.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29404648..29406752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036219.1 → NP_001031296.1  N-lysine methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031296.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBU8, Q8L768, Q9C9R7
      Conserved Domains (1) summary
      pfam13266
      Location:3 → 272
      DUF4057; Protein of unknown function (DUF4057)

    2. NM_106465.4 → NP_177939.2  N-lysine methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177939.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBU8, Q8L768, Q9C9R7
      Conserved Domains (1) summary
      pfam13266
      Location:3 → 272
      DUF4057; Protein of unknown function (DUF4057)

    3. NM_001198495.1 → NP_001185424.1  N-lysine methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185424.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IA48, Q9C9R7
      Conserved Domains (1) summary
      pfam13266
      Location:3 → 301
      DUF4057; Protein of unknown function (DUF4057)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools