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    FAO3 fatty alcohol oxidase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821922, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FAO3
    Official Full Name
    fatty alcohol oxidase 3
    Primary source
    TAIR:AT3G23410
    Locus tag
    AT3G23410
    See related
    Araport:AT3G23410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS FATTY ALCOHOL OXIDASE 3; ATFAO3; fatty alcohol oxidase 3
    Summary
    Encodes a fatty alcohol oxidase.
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    Genomic context

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    See FAO3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (8382672..8386181)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Zinc-binding ribosomal protein family protein Neighboring gene Plastid-lipid associated protein PAP / fibrillin family protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene phosphate 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of long-chain fatty alcohol oxidase LjFAO1 in lotus japonicus. Zhao S, et al. Biotechnol Prog, 2008 May-Jun. PMID 18396913
    2. Functional identification of AtFao3, a membrane bound long chain alcohol oxidase in Arabidopsis thaliana. Cheng Q, et al. FEBS Lett, 2004 Sep 10. PMID 15358540
    3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001338634.1
    NM_113244.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables long-chain-alcohol oxidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables long-chain-alcohol oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in alcohol metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in intracellular membrane-bounded organelle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fatty alcohol oxidase 3
    NP_566729.1
    • fatty alcohol oxidase 3 (FAO3); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 3017 Blast hits to 2907 proteins in 684 species: Archae - 34; Bacteria - 1847; Metazoa - 52; Fungi - 221; Plants - 173; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8382672..8386181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113244.3 → NP_566729.1  fatty alcohol oxidase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566729.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGV0, Q9LW56
      UniProtKB/TrEMBL
      A0A178VPP5, A0A5S9XEW6
      Conserved Domains (2) summary
      COG2303
      Location:251 → 738
      BetA; Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]
      pfam00732
      Location:281 → 502
      GMC_oxred_N; GMC oxidoreductase

    2. NM_001338634.1 → NP_001325678.1  fatty alcohol oxidase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPP5, A0A1I9LLZ5, A0A654FB93
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LW56.1

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