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    AAR3 defective in cullin neddylation protein (DUF298) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822537, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AAR3
    Official Full Name
    defective in cullin neddylation protein (DUF298)
    Primary source
    TAIR:AT3G28970
    Locus tag
    AT3G28970
    See related
    Araport:AT3G28970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    antiauxin-resistant 3
    Summary
    Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.
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    Genomic context

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    See AAR3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (10987785..10990016, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RNA polymerase II, Rpb4, core protein Neighboring gene Cupredoxin superfamily protein Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ncRNA Neighboring gene mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic characterization of mutants resistant to the antiauxin p-chlorophenoxyisobutyric acid reveals that AAR3, a gene encoding a DCN1-like protein, regulates responses to the synthetic auxin 2,4-dichlorophenoxyacetic acid in Arabidopsis roots. Biswas KK, et al. Plant Physiol, 2007 Nov. PMID 17905859, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_113818.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within auxin-activated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    defective in cullin neddylation protein (DUF298)
    NP_189539.1
    • antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10987785..10990016 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338993.1 → NP_001326021.1  defective in cullin neddylation protein (DUF298) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LN05, A0A5S9XGX1, A0A654FCR1

    2. NM_113818.4 → NP_189539.1  defective in cullin neddylation protein (DUF298) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189539.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9MBG8
      UniProtKB/TrEMBL
      A0A5S9XGX1, A0A654FCR1
      Conserved Domains (1) summary
      pfam03556
      Location:82 → 178
      Cullin_binding; Cullin binding
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9MBG8.1

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