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    Concanavalin A-like lectin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831840, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Concanavalin A-like lectin family protein
    Primary source
    TAIR:AT5G01090
    Locus tag
    AT5G01090
    See related
    Araport:AT5G01090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7J8.70; F7J8_70
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (32780..34376)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Beta-galactosidase related protein Neighboring gene miscRNA Neighboring gene O-fucosyltransferase family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_120187.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Concanavalin A-like lectin family protein
    NP_195729.1
    • Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      32780..34376
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120187.3 → NP_195729.1  Concanavalin A-like lectin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195729.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHM3, A0A5S9Y101, A0A654FXC2, Q8LA09, Q9LFC7
      Conserved Domains (1) summary
      cd06899
      Location:29 → 255
      lectin_legume_LecRK_Arcelin_ConA; legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor
    Nucleotide Protein
    Heading Accession and Version

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