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    NUC C2H2-like zinc finger protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834439, updated on 18-Sep-2024

    Summary

    Official Symbol
    NUC
    Official Full Name
    C2H2-like zinc finger protein
    Primary source
    TAIR:AT5G44160
    Locus tag
    AT5G44160
    See related
    Araport:AT5G44160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtIDD8; IDD8; INDETERMINATE DOMAIN 8; MLN1.8; MLN1_8; nutcracker
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    Genomic context

    See NUC in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (17772856..17775749)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FASCICLIN-like arabinogalactan protein 13 precursor Neighboring gene phosphorelay protein Neighboring gene prohibitin 7 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Homeodomain-like transcriptional regulator

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_123783.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    C2H2-like zinc finger protein
    NP_199229.1
    • nutcracker (NUC); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: primary root apical meristem, stem vascular system, embryo, root, embryonic root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G03840.1); Has 52823 Blast hits to 19358 proteins in 362 species: Archae - 0; Bacteria - 0; Metazoa - 50211; Fungi - 300; Plants - 764; Viruses - 0; Other Eukaryotes - 1548 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17772856..17775749
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344535.1 → NP_001330762.1  C2H2-like zinc finger protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBS4, A0A7G2FKB0
    2. NM_123783.4 → NP_199229.1  C2H2-like zinc finger protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199229.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FFH3
      UniProtKB/TrEMBL
      A0A654G8B9, A0A7G2FKB0
      Conserved Domains (1) summary
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]