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    CBSX4 Cystathionine beta-synthase (CBS) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844349, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CBSX4
    Official Full Name
    Cystathionine beta-synthase (CBS) family protein
    Primary source
    TAIR:AT1G80090
    Locus tag
    AT1G80090
    See related
    Araport:AT1G80090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CBS domain containing protein 4; F18B13.17; F18B13_17
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    Genomic context

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    See CBSX4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (30130218..30131940)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pre-mRNA-processing-splicing factor Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene histidine phosphotransfer protein 6 Neighboring gene phloem protein 2-B11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtPV42a and AtPV42b redundantly regulate reproductive development in Arabidopsis thaliana. Fang L, et al. PLoS One, 2011 Apr 20. PMID 21533063, Free PMC Article
    2. Purification, crystallization and preliminary X-ray diffraction analysis of a cystathionine beta-synthase domain-containing protein, CDCP2, from Arabidopsis thaliana. Jeong BC, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2008 Sep 1. PMID 18765915, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. In order to understand the characteristics of plant CBS domain-containing proteins, structural study of the cystathionine beta-synthase domain-containing protein CDCP2 has been initiated.
      Title: Purification, crystallization and preliminary X-ray diffraction analysis of a cystathionine beta-synthase domain-containing protein, CDCP2, from Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001334956.1
    NM_106658.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within developmental process involved in reproduction IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in embryo sac development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube guidance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in stamen development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cystathionine beta-synthase (CBS) family protein
    NP_001319425.1
    • Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      30130218..30131940
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334956.1 → NP_001319425.1  Cystathionine beta-synthase (CBS) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HS24, Q8GXI9, Q9SSD0
      UniProtKB/TrEMBL
      A0A5S9WVX9, A0A654ES69

    2. NM_106658.3 → NP_178126.2  Cystathionine beta-synthase (CBS) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AMX3, A0A5S9WVX9, A0A654ES69
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GXI9.1

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