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    Histone H3 K4-specific methyltransferase SET7/9 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844102, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Histone H3 K4-specific methyltransferase SET7/9 family protein
    Primary source
    TAIR:AT1G77660
    Locus tag
    AT1G77660
    See related
    Araport:AT1G77660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5M16.25; T5M16_25
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (29185838..29187932, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene uncharacterized protein Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Ribonuclease II/R family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_106415.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Histone H3 K4-specific methyltransferase SET7/9 family protein
    NP_177889.1
    • Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT1G21920.1); Has 25589 Blast hits to 6526 proteins in 562 species: Archae - 0; Bacteria - 3550; Metazoa - 4135; Fungi - 204; Plants - 2355; Viruses - 0; Other Eukaryotes - 15345 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29185838..29187932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106415.3 → NP_177889.1  Histone H3 K4-specific methyltransferase SET7/9 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177889.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4Y6, A0A5S9WV77, Q9CAP2
      Conserved Domains (1) summary
      PLN03185
      Location:173 → 351
      PLN03185; phosphatidylinositol phosphate kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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