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    transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820361, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane)
    Primary source
    TAIR:AT3G11880
    Locus tag
    AT3G11880
    See related
    Araport:AT3G11880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (3751558..3754060)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sterile alpha motif (SAM) domain protein Neighboring gene Endoribonuclease/protein kinase IRE1-like protein Neighboring gene Sterile alpha motif (SAM) domain-containing protein Neighboring gene aromatic and neutral transporter 1 Neighboring gene ubiquitin-specific protease 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_112021.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane)
    NP_566403.1
    • Protein of unknown function DUF2359, transmembrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G70770.2); Has 155 Blast hits to 134 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3751558..3754060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337952.1 → NP_001327743.1  transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQA3, A0A5S9XCM3, Q9SF11

    2. NM_001337954.1 → NP_001327742.1  transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LT89

    3. NM_001337953.1 → NP_001327744.1  transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LT91

    4. NM_112021.3 → NP_566403.1  transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566403.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQA3, Q944J9
    Nucleotide Protein
    Heading Accession and Version

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