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    SUS4 sucrose synthase 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823393, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SUS4
    Official Full Name
    sucrose synthase 4
    Primary source
    TAIR:AT3G43190
    Locus tag
    AT3G43190
    See related
    Araport:AT3G43190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4; ATSUS4; sucrose synthase 4
    Summary
    Encodes a protein with sucrose synthase activity (SUS4).
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    Genomic context

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    See SUS4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (15179010..15184105, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene RING/U-box superfamily protein Neighboring gene miscRNA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A reassessment of the role of sucrose synthase in the hypoxic sucrose-ethanol transition in Arabidopsis. Santaniello A, et al. Plant Cell Environ, 2014 Oct. PMID 24810896
    2. Reciprocal modulation of responses to nitrate starvation and hypoxia in roots and leaves of Arabidopsis thaliana. Safavi-Rizi V, et al. Plant Signal Behav, 2024 Dec 31. PMID 38165809, Free PMC Article
    3. Structure and expression profile of the sucrose synthase multigene family in Arabidopsis. Baud S, et al. J Exp Bot, 2004 Feb. PMID 14739263
    4. Analysis of the sucrose synthase gene family in Arabidopsis. Bieniawska Z, et al. Plant J, 2007 Mar. PMID 17257168
    5. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001339091.1
    NM_114187.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables sucrose synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables sucrose synthase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
    involved_in response to hypoxia IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to nitrate starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in sucrose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    sucrose synthase 4
    NP_566865.2
    • sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      15179010..15184105 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114187.5 → NP_566865.2  sucrose synthase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566865.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WT99, Q94CC8, Q9LXL5
      UniProtKB/TrEMBL
      A0A7G2EPY8
      Conserved Domains (3) summary
      PLN00142
      Location:2 → 808
      PLN00142; sucrose synthase
      pfam00534
      Location:567 → 727
      Glycos_transf_1; Glycosyl transferases group 1
      pfam00862
      Location:18 → 555
      Sucrose_synth; Sucrose synthase

    2. NM_001339091.1 → NP_001326640.1  sucrose synthase 4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WT99, Q94CC8, Q9LXL5
      UniProtKB/TrEMBL
      A0A7G2EPY8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LXL5.1

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