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    Phosphoinositide phosphatase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823397, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Phosphoinositide phosphatase family protein
    Primary source
    TAIR:AT3G43220
    Locus tag
    AT3G43220
    See related
    Araport:AT3G43220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SAC3; suppressor of actin 3
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    16
    Sequence:
    Chromosome: 3; NC_003074.8 (15196812..15203139, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ATP binding microtubule motor family protein Neighboring gene RING/FYVE/PHD-type zinc finger family protein Neighboring gene ARID/BRIGHT DNA-binding domain-containing protein Neighboring gene coiled-coil protein (DUF572)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001161189.1
    NM_001339096.1
    NM_114190.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in phosphatidylinositol dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Phosphoinositide phosphatase family protein
    NP_001154661.1
    • Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2101 Blast hits to 1628 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 799; Fungi - 628; Plants - 328; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink).
    NP_189908.2
    • Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2131 Blast hits to 1660 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 800; Fungi - 658; Plants - 325; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      15196812..15203139 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114190.3 → NP_189908.2  Phosphoinositide phosphatase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189908.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7XZU2, Q8LPQ2, Q9LXL2
      UniProtKB/TrEMBL
      A0A5S9XHF1
      Conserved Domains (1) summary
      pfam02383
      Location:89 → 387
      Syja_N; SacI homology domain

    2. NM_001339096.1 → NP_001326701.1  Phosphoinositide phosphatase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQ31, A0A5S9XHF1

    3. NM_001161189.1 → NP_001154661.1  Phosphoinositide phosphatase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154661.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XHF1, F4IXV2
      Conserved Domains (1) summary
      pfam02383
      Location:89 → 387
      Syja_N; SacI homology domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7XZU2.1

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