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    cyclin-dependent kinase inhibitor SMR3-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831836, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cyclin-dependent kinase inhibitor SMR3-like protein
    Primary source
    TAIR:AT5G02420
    Locus tag
    AT5G02420
    See related
    Araport:AT5G02420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T22P11.10; T22P11_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (523257..524076)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pol-like 2 Neighboring gene DIE2/ALG10 family Neighboring gene ncRNA Neighboring gene Transducin/WD40 repeat-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SIAMESE, a plant-specific cell cycle regulator, controls endoreplication onset in Arabidopsis thaliana. Churchman ML, et al. Plant Cell, 2006 Nov. PMID 17098811, Free PMC Article
    2. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_120320.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA endoreduplication IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cyclin-dependent kinase inhibitor SMR3-like protein
    NP_195862.1
    • unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      523257..524076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120320.3 → NP_195862.1  cyclin-dependent kinase inhibitor SMR3-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195862.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LD37, Q9LZ60
      UniProtKB/TrEMBL
      A0A178UGG1, A0A5S9Y1E5, A0A654FXQ4
      Conserved Domains (1) summary
      PLN03031
      Location:18 → 83
      PLN03031; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LZ60.1

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