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    ER enhancer of rudimentary protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830948, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ER
    Official Full Name
    enhancer of rudimentary protein
    Primary source
    TAIR:AT5G10810
    Locus tag
    AT5G10810
    See related
    Araport:AT5G10810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA ENHANCER OF RUDIMENTARY HOMOLOGUE; ATER; ENHANCER OF RUDIMENTARY HOMOLOG ATER; ENHANCER OF RUDIMENTARY HOMOLOGUE; T30N20.80; T30N20_80
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (3418610..3420692, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit-like protein Neighboring gene ubiquitin-specific protease 22 Neighboring gene RNA recognition motif (RRM)-containing protein Neighboring gene Major facilitator superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Endomembrane protein 70 protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121119.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    enhancer of rudimentary protein
    NP_568240.1
    • ENHANCER OF RUDIMENTARY HOMOLOGUE (ER); CONTAINS InterPro DOMAIN/s: Enhancer of rudimentary (InterPro:IPR000781); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3418610..3420692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121119.3 → NP_568240.1  enhancer of rudimentary protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568240.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q96319, Q9LEV8
      UniProtKB/TrEMBL
      A0A178UA53, A0A384LQ50, Q541Y0
      Conserved Domains (1) summary
      pfam01133
      Location:8 → 105
      ER; Enhancer of rudimentary
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96319.1

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