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    ABC family ABC transporter, putative (DUF3511) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831070, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ABC family ABC transporter, putative (DUF3511)
    Primary source
    TAIR:AT5G11970
    Locus tag
    AT5G11970
    See related
    Araport:AT5G11970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14F18.140; F14F18_140
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (3862849..3863824, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Putative lysine decarboxylase family protein Neighboring gene magnesium transporter, putative (DUF803) Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene conserved oligomeric Golgi complex component-related / COG complex component-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_121235.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ABC family ABC transporter, putative (DUF3511)
    NP_196758.1
    • Protein of unknown function (DUF3511); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3511 (InterPro:IPR021899); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3511) (TAIR:AT2G19460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3862849..3863824 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121235.4 → NP_196758.1  ABC family ABC transporter, putative (DUF3511) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196758.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UDQ1, Q9LYH6
      Conserved Domains (1) summary
      pfam12023
      Location:60 → 103
      DUF3511; Domain of unknown function (DUF3511)
    Nucleotide Protein
    Heading Accession and Version

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