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    exosome complex exonuclease [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832625, updated on 18-Sep-2024

    Summary

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    Official Full Name
    exosome complex exonuclease
    Primary source
    TAIR:AT5G25500
    Locus tag
    AT5G25500
    See related
    Araport:AT5G25500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T14C9.40; T14C9_40
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (8880863..8882542)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DNA methyltransferase-2 Neighboring gene Ran BP2/NZF zinc finger-like superfamily protein Neighboring gene ncRNA Neighboring gene Protein phosphatase 2A regulatory B subunit family protein Neighboring gene ncRNA Neighboring gene SPOC domain / Transcription elongation factor S-II protein Neighboring gene DNAJ heat shock family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtFH1 formin mutation affects actin filament and microtubule dynamics in Arabidopsis thaliana. Rosero A, et al. J Exp Bot, 2013 Jan. PMID 23202131, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtFH1 mutation affects actin filament and microtubule dynamics.
      Title: AtFH1 formin mutation affects actin filament and microtubule dynamics in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_122461.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    exosome complex exonuclease
    NP_197932.1
    • unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8880863..8882542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122461.2 → NP_197932.1  exosome complex exonuclease [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197932.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UDS5, Q5XV34
    Nucleotide Protein
    Heading Accession and Version

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