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    SAC8 SAC domain-containing protein 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824346, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SAC8
    Official Full Name
    SAC domain-containing protein 8
    Primary source
    TAIR:AT3G51830
    Locus tag
    AT3G51830
    See related
    Araport:AT3G51830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATG5; SAC domain-containing protein 8; TRANSMEMBRANE PROTEIN G5P
    Summary
    putative transmembrane protein G5p (AtG5) mRNA, complete
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    Genomic context

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    See SAC8 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Sequence:
    Chromosome: 3; NC_003074.8 (19220116..19225280)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Stress induced protein Neighboring gene UbiA prenyltransferase family protein Neighboring gene acyl-CoA oxidase 4 Neighboring gene calcium-dependent protein kinase 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtATG genes, homologs of yeast autophagy genes, are involved in constitutive autophagy in Arabidopsis root tip cells. Inoue Y, et al. Plant Cell Physiol, 2006 Dec. PMID 17085765
    2. Three SAC1-like genes show overlapping patterns of expression in Arabidopsis but are remarkably silent during embryo development. Despres B, et al. Plant J, 2003 May. PMID 12713536
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_115042.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SAC domain-containing protein 8
    NP_001319727.1
    • SAC domain-containing protein 8 (SAC8); FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G66020.1).
    NP_190751.2
    • SAC domain-containing protein 8 (SAC8); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1752 Blast hits to 1640 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 573; Fungi - 577; Plants - 291; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19220116..19225280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339534.1 → NP_001319727.1  SAC domain-containing protein 8 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4J4J9

    2. NM_115042.3 → NP_190751.2  SAC domain-containing protein 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190751.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q96328
      UniProtKB/TrEMBL
      A0A654FEZ5
      Conserved Domains (1) summary
      pfam02383
      Location:65 → 348
      Syja_N; SacI homology domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96328.1

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