U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    STL2P SEC12P-like 2 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814675, updated on 18-Sep-2024

    Summary

    Official Symbol
    STL2P
    Official Full Name
    SEC12P-like 2 protein
    Primary source
    TAIR:AT2G01470
    Locus tag
    AT2G01470
    See related
    Araport:AT2G01470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSEC12; F2I9.9; F2I9_9; SEC12P-like 2 protein
    Summary
    Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See STL2P in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (211913..214473, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene DEAD/DEAH box RNA helicase family protein Neighboring gene ncRNA Neighboring gene MAP kinase 17 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene O-fucosyltransferase family protein Neighboring gene phytanoyl-CoA dioxygenase (PhyH) family protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    SEC12P-like 2 protein
    NP_178256.1
    • SEC12P-like 2 protein (STL2P); FUNCTIONS IN: nucleotide binding; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: integral to endoplasmic reticulum membrane, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6374 Blast hits to 3814 proteins in 364 species: Archae - 22; Bacteria - 2789; Metazoa - 1016; Fungi - 1422; Plants - 400; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      211913..214473 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126208.4NP_178256.1  SEC12P-like 2 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178256.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q39221, Q7EP29, Q8VZ72
      UniProtKB/TrEMBL
      A0A178VVH6, A0A7G2E6R6
      Conserved Domains (3) summary
      COG2319
      Location:77354
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:158193
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:116354
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...