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    PLA-I{gamma}1 alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837191, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PLA-I{gamma}1
    Official Full Name
    alpha/beta-Hydrolases superfamily protein
    Primary source
    TAIR:AT1G06800
    Locus tag
    AT1G06800
    See related
    Araport:AT1G06800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DAD1-Like Lipase 4; DALL4; F4H5.11; F4H5_11; phospholipase A I gamma 1
    Summary
    Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.
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    Genomic context

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    See PLA-I{gamma}1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (2089417..2091686, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene galacturonosyltransferase 6 Neighboring gene RNA polymerase Rpb7 N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene endonuclease/glycosyl hydrolase Neighboring gene carotenoid isomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Enzymatic characterization of class I DAD1-like acylhydrolase members targeted to chloroplast in Arabidopsis. Seo YS, et al. FEBS Lett, 2009 Jul 7. PMID 19527719
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    NM_100557.2
    NM_179272.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables galactolipase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phospholipase A1 activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables triacylglycerol lipase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha/beta-Hydrolases superfamily protein
    NP_563772.1
    • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G30550.1); Has 1442 Blast hits to 1434 proteins in 292 species: Archae - 0; Bacteria - 280; Metazoa - 45; Fungi - 278; Plants - 597; Viruses - 3; Other Eukaryotes - 239 (source: NCBI BLink).
    NP_849603.1
    • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G30550.2); Has 1444 Blast hits to 1435 proteins in 292 species: Archae - 0; Bacteria - 280; Metazoa - 45; Fungi - 276; Plants - 599; Viruses - 3; Other Eukaryotes - 241 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2089417..2091686 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179272.2 → NP_849603.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849603.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q941F1, Q9M9Y7
      UniProtKB/TrEMBL
      A0A178WG46, A0A5S9SZH6
      Conserved Domains (1) summary
      cl21494
      Location:1 → 515
      Abhydrolase; alpha/beta hydrolases

    2. NM_100557.2 → NP_563772.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563772.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HNT5
      Conserved Domains (1) summary
      cl21494
      Location:1 → 433
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q941F1.2

    Gene LinkOut

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