U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DNAJ heat shock N-terminal domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819808, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    DNAJ heat shock N-terminal domain-containing protein
    Primary source
    TAIR:AT3G06340
    Locus tag
    AT3G06340
    See related
    Araport:AT3G06340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24P17.19; F24P17_19
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (1920137..1923738, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene tRNA-Pro Neighboring gene dehydroquinate dehydratase, putative / shikimate dehydrogenase Neighboring gene arabinogalactan protein 27

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001035572.1
    NM_001337649.1
    NM_111509.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNAJ heat shock N-terminal domain-containing protein
    NP_001030649.1
    • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G18750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001189825.1
    • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G18750.1).
    NP_187285.1
    • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G18750.1); Has 30113 Blast hits to 20235 proteins in 3128 species: Archae - 135; Bacteria - 16840; Metazoa - 4469; Fungi - 1889; Plants - 1858; Viruses - 32; Other Eukaryotes - 4890 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1920137..1923738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202896.2 → NP_001189825.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189825.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F5V2, Q9SQT7
      Conserved Domains (2) summary
      pfam00226
      Location:67 → 128
      DnaJ; DnaJ domain
      pfam11926
      Location:425 → 628
      DUF3444; Domain of unknown function (DUF3444)

    2. NM_111509.3 → NP_187285.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187285.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F5V2, Q9SQT7
      Conserved Domains (2) summary
      pfam00226
      Location:67 → 128
      DnaJ; DnaJ domain
      pfam11926
      Location:425 → 628
      DUF3444; Domain of unknown function (DUF3444)

    3. NM_001337649.1 → NP_001326143.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F5V2, Q9SQT7

    4. NM_001035572.1 → NP_001030649.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030649.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F5V2, Q9SQT7
      Conserved Domains (2) summary
      pfam00226
      Location:67 → 128
      DnaJ; DnaJ domain
      pfam11926
      Location:425 → 628
      DUF3444; Domain of unknown function (DUF3444)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools