U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    EXO70B2 exocyst subunit exo70 family protein B2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837210, updated on 18-Sep-2024

    Summary

    Official Symbol
    EXO70B2
    Official Full Name
    exocyst subunit exo70 family protein B2
    Primary source
    TAIR:AT1G07000
    Locus tag
    AT1G07000
    See related
    Araport:AT1G07000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATEXO70B2; exocyst subunit exo70 family protein B2; F10K1.28; F10K1_28
    Summary
    A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See EXO70B2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (2150158..2152541, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_100573.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular exosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     
    located_in plasma membrane HDA PubMed 

    General protein information

    Preferred Names
    exocyst subunit exo70 family protein B2
    NP_172181.1
    • exocyst subunit exo70 family protein B2 (EXO70B2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, plasma membrane, exocyst; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B1 (TAIR:AT5G58430.1); Has 788 Blast hits to 778 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 10; Plants - 642; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2150158..2152541 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100573.4NP_172181.1  exocyst subunit exo70 family protein B2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172181.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56YJ9, Q9LMJ4
      UniProtKB/TrEMBL
      A0A178WCB5, A0A5S9T0P7, A0A654E7F3, A0A7G2DR93
      Conserved Domains (1) summary
      pfam03081
      Location:248590
      Exo70; Exo70 exocyst complex subunit