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    Metallopeptidase M24 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829070, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Metallopeptidase M24 family protein
    Primary source
    TAIR:AT4G29490
    Locus tag
    AT4G29490
    See related
    Araport:AT4G29490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17A13.310; F17A13_310
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    16
    Sequence:
    Chromosome: 4; NC_003075.7 (14487883..14491620)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Phospholipase A2 family protein Neighboring gene Mitochondrial ATP synthase subunit G protein Neighboring gene arginine methyltransferase 11 Neighboring gene nucleophosmin Neighboring gene Pyridoxal phosphate phosphatase-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119094.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metalloaminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Metallopeptidase M24 family protein
    NP_194678.2
    • Metallopeptidase M24 family protein; FUNCTIONS IN: manganese ion binding, aminopeptidase activity; INVOLVED IN: cellular process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT1G09300.1); Has 11688 Blast hits to 11680 proteins in 2580 species: Archae - 275; Bacteria - 8182; Metazoa - 386; Fungi - 373; Plants - 96; Viruses - 0; Other Eukaryotes - 2376 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14487883..14491620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119094.5 → NP_194678.2  Metallopeptidase M24 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194678.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZ61, Q0WUQ7, Q8L780
      Conserved Domains (2) summary
      smart01011
      Location:9 → 152
      AMP_N; Aminopeptidase P, N-terminal domain
      cd01087
      Location:190 → 465
      Prolidase; E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
    Nucleotide Protein
    Heading Accession and Version

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