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    PBL1 PBS1-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824711, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PBL1
    Official Full Name
    PBS1-like 1
    Primary source
    TAIR:AT3G55450
    Locus tag
    AT3G55450
    See related
    Araport:AT3G55450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PBS1-like 1
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    Genomic context

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    See PBL1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (20557644..20560235)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene triosephosphate isomerase Neighboring gene SC35-like splicing factor 30 Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene protein affected trafficking 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Microbe-associated molecular pattern-induced calcium signaling requires the receptor-like cytoplasmic kinases, PBL1 and BIK1. Ranf S, et al. BMC Plant Biol, 2014 Dec 19. PMID 25522736, Free PMC Article
    2. BIK1 interacts with PEPRs to mediate ethylene-induced immunity. Liu Z, et al. Proc Natl Acad Sci U S A, 2013 Apr 9. PMID 23431184, Free PMC Article
    3. Receptor-like cytoplasmic kinases integrate signaling from multiple plant immune receptors and are targeted by a Pseudomonas syringae effector. Zhang J, et al. Cell Host Microbe, 2010 Apr 22. PMID 20413097
    4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. required for microbe- or damage-associated molecular pattern-induced calcium signaling
      Title: Microbe-associated molecular pattern-induced calcium signaling requires the receptor-like cytoplasmic kinases, PBL1 and BIK1.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001203168.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to molecule of bacterial origin IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PBS1-like 1
    NP_001190097.1
    • PBS1-like 1 (PBL1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: botrytis-induced kinase1 (TAIR:AT2G39660.1).
    NP_191105.2
    • PBS1-like 1 (PBL1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: botrytis-induced kinase1 (TAIR:AT2G39660.1); Has 117813 Blast hits to 116491 proteins in 4459 species: Archae - 97; Bacteria - 13696; Metazoa - 43658; Fungi - 9742; Plants - 33316; Viruses - 361; Other Eukaryotes - 16943 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20557644..20560235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115403.4 → NP_191105.2  PBS1-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191105.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84WH8, Q8H186, Q9M2T4
      UniProtKB/TrEMBL
      A0A178V6L5, A0A5S9XLR9
      Conserved Domains (1) summary
      cd14066
      Location:67 → 347
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    2. NM_001203168.1 → NP_001190097.1  PBS1-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190097.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IWV6
      Conserved Domains (2) summary
      cd14066
      Location:104 → 384
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam07714
      Location:103 → 381
      Pkinase_Tyr; Protein tyrosine kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8H186.1

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