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    acylphosphatase family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831859, updated on 18-Sep-2024

    Summary

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    Official Full Name
    acylphosphatase family
    Primary source
    TAIR:AT5G03370
    Locus tag
    AT5G03370
    See related
    Araport:AT5G03370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12E4.110; F12E4_110
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (825537..827502, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene cysteine/histidine-rich C1 domain protein Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene hypothetical protein (DUF295)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_120416.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acylphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    acylphosphatase family
    NP_195957.1
    • acylphosphatase family; FUNCTIONS IN: acylphosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acylphosphatase-like (InterPro:IPR001792), Acylphosphatase, conserved site (InterPro:IPR017968), Acylphosphatase (InterPro:IPR020456); Has 2946 Blast hits to 2946 proteins in 1156 species: Archae - 171; Bacteria - 2226; Metazoa - 216; Fungi - 33; Plants - 44; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      825537..827502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120416.5 → NP_195957.1  acylphosphatase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195957.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJV7, A0A654FXY8, Q0WU79, Q8LAE7, Q9LZF2
      Conserved Domains (1) summary
      cl00551
      Location:83 → 171
      Acylphosphatase
    Nucleotide Protein
    Heading Accession and Version

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