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    MCT2 MEI2 C-terminal RRM only like 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830687, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MCT2
    Official Full Name
    MEI2 C-terminal RRM only like 2
    Primary source
    TAIR:AT5G07930
    Locus tag
    AT5G07930
    See related
    Araport:AT5G07930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13G24.130; MEI2 C-terminal RRM only like 2
    Summary
    a member of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only.
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    Genomic context

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    See MCT2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (2530834..2532742)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene diacylglycerol kinase1 Neighboring gene dentin sialophosphoprotein-like protein Neighboring gene uncharacterized protein Neighboring gene asterix-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PLASTOCHRON2 regulates leaf initiation and maturation in rice. Kawakatsu T, et al. Plant Cell, 2006 Mar. PMID 16461585, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    MEI2 C-terminal RRM only like 2
    NP_001078544.1
    • MEI2 C-terminal RRM only like 2 (MCT2); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 606 Blast hits to 490 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 378; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).
    NP_001190253.1
    • MEI2 C-terminal RRM only like 2 (MCT2); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1).
    NP_196410.1
    • MEI2 C-terminal RRM only like 2 (MCT2); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 545 Blast hits to 437 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 381; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2530834..2532742
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203324.1 → NP_001190253.1  MEI2 C-terminal RRM only like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190253.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FZQ2, F4K9I2
      Conserved Domains (1) summary
      cd12277
      Location:137 → 233
      RRM3_MEI2_EAR1_like; RNA recognition motif 3 (RRM3) found in Mei2-like proteins and terminal EAR1-like proteins

    2. NM_001085075.1 → NP_001078544.1  MEI2 C-terminal RRM only like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078544.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F7W8, Q1PDY7
      Conserved Domains (1) summary
      cd12277
      Location:137 → 233
      RRM3_MEI2_EAR1_like; RNA recognition motif 3 in Mei2-like proteins and terminal EAR1-like proteins

    3. NM_120875.1 → NP_196410.1  MEI2 C-terminal RRM only like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196410.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UDW0, A0A654FZQ2, Q9SD91
      Conserved Domains (1) summary
      cd12277
      Location:137 → 233
      RRM3_MEI2_EAR1_like; RNA recognition motif 3 in Mei2-like proteins and terminal EAR1-like proteins
    Nucleotide Protein
    Heading Accession and Version

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