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    LOW protein: F-box/FBD/LRR-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832335, updated on 18-Sep-2024

    Summary

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    Official Full Name
    LOW protein: F-box/FBD/LRR-like protein
    Primary source
    TAIR:AT5G22700
    Locus tag
    AT5G22700
    See related
    Araport:AT5G22700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MDJ22.12; MDJ22_12
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (7545481..7549393, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box protein Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene F-box/FBD/LRR protein Neighboring gene F-box/RNI-like/FBD-like domains-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343750.1
    NM_001343751.1
    NM_001343754.1
    NM_001343755.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LOW protein: F-box/FBD/LRR-like protein
    NP_001318621.1
    • F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein (TAIR:AT5G22660.2); Has 2254 Blast hits to 2213 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7545481..7549393 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343753.1 → NP_001332571.1  LOW protein: F-box/FBD/LRR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0SVQ1, Q9FNJ1
      UniProtKB/TrEMBL
      A0A178UE07

    2. NM_001343752.1 → NP_001332573.1  LOW protein: F-box/FBD/LRR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0SVQ1, Q9FNJ1
      UniProtKB/TrEMBL
      A0A178UE07

    3. NM_001343750.1 → NP_001318621.1  LOW protein: F-box/FBD/LRR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0SVQ1, Q9FNJ1
      UniProtKB/TrEMBL
      A0A178UE07

    4. NM_001343751.1 → NP_001332574.1  LOW protein: F-box/FBD/LRR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0SVQ1, Q9FNJ1
      UniProtKB/TrEMBL
      A0A178UE07

    5. NM_001343755.1 → NP_001332572.1  LOW protein: F-box/FBD/LRR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UE07, A0A1P8BHD3

    6. NM_001343754.1 → NP_001332575.1  LOW protein: F-box/FBD/LRR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UE07, A0A1P8BHE0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FNJ1.2

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