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    ATAUX2-11 AUX/IAA transcriptional regulator family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834390, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATAUX2-11
    Official Full Name
    AUX/IAA transcriptional regulator family protein
    Primary source
    TAIR:AT5G43700
    Locus tag
    AT5G43700
    See related
    Araport:AT5G43700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AUXIN INDUCIBLE 2-11; IAA4; indole-3-acetic acid inducible 4; MQD19.3; MQD19_3
    Summary
    Auxin inducible protein similar to transcription factors.
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    Genomic context

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    See ATAUX2-11 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (17550179..17551715)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene uncharacterized protein Neighboring gene Glycosyl hydrolase family 47 protein Neighboring gene rRNA-processing EFG1-like protein (DUF2361)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Early auxin-induced genes encode short-lived nuclear proteins. Abel S, et al. Proc Natl Acad Sci U S A, 1994 Jan 4. PMID 8278386, Free PMC Article
    2. The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana. Abel S, et al. J Mol Biol, 1995 Aug 25. PMID 7658471
    3. Protein-protein interactions among the Aux/IAA proteins. Kim J, et al. Proc Natl Acad Sci U S A, 1997 Oct 28. PMID 9342315, Free PMC Article
    4. AUXIN RESPONSE FACTOR8 regulates Arabidopsis petal growth by interacting with the bHLH transcription factor BIGPETALp. Varaud E, et al. Plant Cell, 2011 Mar. PMID 21421811, Free PMC Article
    5. Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis. Piya S, et al. Front Plant Sci, 2014. PMID 25566309, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_123736.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    AUX/IAA transcriptional regulator family protein
    NP_199183.1
    • AUXIN INDUCIBLE 2-11 (ATAUX2-11); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17550179..17551715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123736.3 → NP_199183.1  AUX/IAA transcriptional regulator family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199183.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P33077
      UniProtKB/TrEMBL
      A0A178UTD3, A0A384LA06, E1A745, Q0WTK3
      Conserved Domains (1) summary
      pfam02309
      Location:15 → 182
      AUX_IAA; AUX/IAA family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P33077.2

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