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    CYCA1;1 Cyclin A1;1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841014, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYCA1;1
    Official Full Name
    Cyclin A1;1
    Primary source
    TAIR:AT1G44110
    Locus tag
    AT1G44110
    See related
    Araport:AT1G44110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Cyclin A1;1; T7O23.18; T7O23_18
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    Genomic context

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    See CYCA1;1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (16774765..16777352, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene gibberellin 20-oxidase 5 Neighboring gene amino acid permease 5 Neighboring gene ncRNA Neighboring gene CELLULOSE SYNTHASE INTERACTIVE 2 Neighboring gene ncRNA Neighboring gene Eukaryotic aspartyl protease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis anaphase-promoting complexes: multiple activators and wide range of substrates might keep APC perpetually busy. Fülöp K, et al. Cell Cycle, 2005 Aug. PMID 15970679
    2. Systematic localization of the Arabidopsis core cell cycle proteins reveals novel cell division complexes. Boruc J, et al. Plant Physiol, 2010 Feb. PMID 20018602, Free PMC Article
    3. Functional modules in the Arabidopsis core cell cycle binary protein-protein interaction network. Boruc J, et al. Plant Cell, 2010 Apr. PMID 20407024, Free PMC Article
    4. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_103537.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic cell cycle phase transition IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cyclin A1;1
    NP_175077.1
    • Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16774765..16777352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103537.5 → NP_175077.1  Cyclin A1;1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175077.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C6Y3
      UniProtKB/TrEMBL
      A0A178W0H5, A0A5S9WM67, A0A654EHN4
      Conserved Domains (2) summary
      cd20506
      Location:326 → 440
      CYCLIN_AtCycA-like_rpt2; second cyclin box found in Arabidopsis thaliana A-type cyclins (CycAs) and similar proteins
      cd20562
      Location:187 → 322
      CYCLIN_AtCycA_like_rpt1; first cyclin box found in Arabidopsis thaliana A-type cyclins (CycAs) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C6Y3.1

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