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    CHX15 cation/hydrogen exchanger 15 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815847, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CHX15
    Official Full Name
    cation/hydrogen exchanger 15
    Primary source
    TAIR:AT2G13620
    Locus tag
    AT2G13620
    See related
    Araport:AT2G13620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCHX15; CATION/H+ EXCHANGER 15; cation/hydrogen exchanger 15; T10F5.16; T10F5_16
    Summary
    member of Putative Na+/H+ antiporter family
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    Genomic context

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    See CHX15 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (5677908..5680801)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ABC-2 type transporter family protein Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene Transcription factor IIS family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant-specific cation/H+ exchanger 17 and its homologs are endomembrane K+ transporters with roles in protein sorting. Chanroj S, et al. J Biol Chem, 2011 Sep 30. PMID 21795714, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sodium:proton antiporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of pH IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cation/hydrogen exchanger 15
    NP_178985.1
    • cation/hydrogen exchanger 15 (CHX15); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 19 (TAIR:AT3G17630.1); Has 10260 Blast hits to 10223 proteins in 2141 species: Archae - 371; Bacteria - 8129; Metazoa - 51; Fungi - 171; Plants - 694; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      5677908..5680801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126941.2 → NP_178985.1  cation/hydrogen exchanger 15 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178985.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SIT5
      UniProtKB/TrEMBL
      A0A178VRJ9, A0A5S9WY56, A0A654EU79
      Conserved Domains (1) summary
      PLN03159
      Location:1 → 821
      PLN03159; cation/H(+) antiporter 15; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SIT5.1

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