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    Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842816, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
    Primary source
    TAIR:AT1G65080
    Locus tag
    AT1G65080
    See related
    Araport:AT1G65080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16G16.8; F16G16_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (24176563..24180871)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene 4-coumarate:CoA ligase 3 Neighboring gene DNA mismatch repair protein MutS, type 2 Neighboring gene nucleolin Neighboring gene Ubiquitin carboxyl-terminal hydrolase-related protein Neighboring gene SCR-like 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The OXA2a Insertase of Arabidopsis Is Required for Cytochrome c Maturation. Kolli R, et al. Plant Physiol, 2020 Oct. PMID 32759271, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105182.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables membrane insertase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within mitochondrial cytochrome c oxidase assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
    NP_176688.3
    • Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT3G44370.1); Has 1367 Blast hits to 1362 proteins in 525 species: Archae - 4; Bacteria - 825; Metazoa - 205; Fungi - 148; Plants - 104; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24176563..24180871
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105182.5 → NP_176688.3  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176688.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L718, Q9SS52
      UniProtKB/TrEMBL
      A0A178W6U1
      Conserved Domains (3) summary
      sd00006
      Location:346 → 374
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:346 → 408
      TPR_11; TPR repeat
      cl00489
      Location:86 → 301
      60KD_IMP; 60Kd inner membrane protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L718.2

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